STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0488Conserved hypothetical protein. (190 aa)    
Predicted Functional Partners:
Rmet_0490
Conserved hypothetical protein.
 
    0.811
Rmet_0489
Hydrolase of the alpha/beta-hydrolase fold family, YheT type.
       0.636
Rmet_1062
Hydrolase, alpha/beta fold family.
  
    0.627
phaP
Phasin (PHA-granule associated protein).
  
    0.623
Rmet_2482
Conserved hypothetical protein.
  
    0.604
Rmet_2064
Putative competence-damage protein.
  
    0.597
rfaF
ADP-heptose:LPS heptosyltransferase II.
  
    0.596
Rmet_3378
GCN5-related N-acetyltransferase.
  
    0.558
Rmet_0988
Cytochrome c553.
  
    0.550
Rmet_0498
Conserved hypothetical protein.
 
    0.540
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.