STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0499Transcriptional regulator, LuxR-family. (377 aa)    
Predicted Functional Partners:
Rmet_0500
Putative transcriptional regulator, LuxR-family.
 
   
0.647
Rmet_2594
Conserved hypothetical protein (secreted).
  
     0.639
Rmet_1740
Putative membrane protein.
  
    0.612
Rmet_3542
Hypothetical protein.
  
    0.601
Rmet_2685
Putative Type IV pilus assembly protein, tip-associated adhesin (PilY1-like).
  
   
 0.515
Rmet_0422
Conserved hypothetical protein (secreted).
  
     0.509
Rmet_3344
Conserved hypothetical protein.
  
     0.508
Rmet_3475
Putative ABC-type branched-chain amino acid transport system, periplasmic component.
  
     0.487
Rmet_0474
Putative lipidA core O-antigen ligase transmembrane protein.
 
     0.476
addB
ATP-dependent nuclease, subunit B.
  
     0.471
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.