STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0545Alcohol dehydrogenase, zinc-containing. (365 aa)    
Predicted Functional Partners:
adh
Alcohol dehydrogenase, 1-propanol preferring.
 
0.942
puuC
gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent; Belongs to the aldehyde dehydrogenase family.
 
 0.917
betB
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.917
Rmet_1898
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.917
Rmet_3207
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.917
Rmet_2502
Gluconate 2-dehydrogenase cytochrome c subunit precursor (GADH cytochrome c subunit) (GA 2-DH cytochrome c subunit).
   
 
  0.900
Rmet_0543
Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region.
  
  
 0.746
Rmet_0544
Putative transcriptional regulator, TetR-family.
  
  
 0.690
Rmet_3081
Oxidoreductase (2,5-didehydrogluconate reductase).
 
 
 0.488
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.476
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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