STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0573Putative tetratricopeptide repeat-like protein. (267 aa)    
Predicted Functional Partners:
cpdB
2':3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family.
  
  
 0.752
modA
Molybdate transporter subunit; periplasmic-binding component of ABC superfamily.
  
  
 0.450
Rmet_2275
Putative AAA ATPase protein.
   
 0.439
Rmet_2342
Putative AAA ATPase, central region.
   
 0.439
Rmet_0628
Putative sel1-like repeat; harboring protein.
  
     0.419
Rmet_0630
Putative sel1-like repeat; harboring protein.
  
     0.415
modB
Molybdate transporter subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
    0.413
modC
Molybdate transporter subunit, ABC-type transporter, ATPase component: MolT family.
       0.403
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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