STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0604Putative esterase (modular protein). (407 aa)    
Predicted Functional Partners:
Rmet_0603
Putative integral membrane sensor protein precursor.
 
    0.863
Rmet_0369
ABC-type transporter, ATPase and permease components.
   
 
 0.506
Rmet_0602
Conserved hypothetical protein.
  
    0.502
Rmet_3056
Exoribonuclease II (RNB)-family protein.
 
    0.480
mmfB
Undecaprenyl pyrophosphate phosphatase (Tn6048).
 
  
 0.455
ivd1
isovaleryl-CoA dehydrogenase.
  
 0.407
gcdH
Glutaryl-CoA dehydrogenase.
  
 0.406
Rmet_0108
acyl-CoA dehydrogenase, short-chain specific.
  
 0.405
Rmet_0739
Acyl-CoA dehydrogenase.
  
 0.405
Rmet_0944
Acyl-CoA dehydrogenase.
  
 0.404
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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