STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accCacetyl-CoA carboxylase, biotin carboxylase subunit. (679 aa)    
Predicted Functional Partners:
accB
Acetyl/propionyl-CoA carboxylase,carboxyltransferase subunit.
 0.998
pccB
Propionyl-CoA carboxylase beta chain.
 0.966
Rmet_0113
Enoyl-CoA hydratase/carnithine racemase.
 0.940
accB-2
Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 0.938
accD
acetyl-CoA carboxylase, beta (carboxyltranferase) subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 0.931
ivd1
isovaleryl-CoA dehydrogenase.
 
 0.930
paaF
enoyl-CoA hydratase-isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.925
Rmet_1814
acyl-CoA dehydrogenase, short-chain specific.
  
 0.923
Rmet_0841
Putative enoyl-CoA hydratase/isomerase.
  
 0.921
Rmet_0080
Enoyl-CoA hydratase (ECH); Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.920
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.