STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accBAcetyl/propionyl-CoA carboxylase,carboxyltransferase subunit. (535 aa)    
Predicted Functional Partners:
accC
acetyl-CoA carboxylase, biotin carboxylase subunit.
 0.998
ivd1
isovaleryl-CoA dehydrogenase.
 
 
 0.969
Rmet_0113
Enoyl-CoA hydratase/carnithine racemase.
 
 0.948
accC-2
Acetyl-CoA carboxylase biotin carboxylase subunit.
 0.930
Rmet_1814
acyl-CoA dehydrogenase, short-chain specific.
  
 
 0.922
Rmet_2199
acyl-CoA dehydrogenase-like protein.
  
 
 0.922
Rmet_0845
Acyl-CoA dehydrogenase.
  
 
 0.921
Rmet_0968
Acyl-CoA dehydrogenase (ACAD).
  
 
 0.921
ivd
isovaleryl-CoA dehydrogenase (IVDHase).
  
 
 0.921
ivd1-2
isovaleryl-CoA dehydrogenase (IVDHase).
  
 
 0.921
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.