STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0613Putative two-component sensor histidine kinase precursor. (645 aa)    
Predicted Functional Partners:
Rmet_0612
Two component transcriptional regulator, LuxR family.
 
 
 0.968
Rmet_3576
Two component transcriptional regulator, LuxR family.
 
 
 0.831
Rmet_0459
Putative two component transcriptional regulator, LuxR family.
 
 
 0.830
vsrC
Response regulator VsrC transcription regulator protein NarL-family.
 
 
 0.829
Rmet_2153
Two component transcriptional regulator, LuxR family.
 
 
 0.826
Rmet_0090
Response regulator, NarL-family.
 
 
 0.820
narL
Transcriptional regulator, luxR family.
 
 
 0.797
Rmet_0092
Signal transduction histidine kinase containing a CHASE3 sensory domain.
  
    0.747
Rmet_1740
Putative membrane protein.
  
    0.561
Rmet_2594
Conserved hypothetical protein (secreted).
  
  
 0.505
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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