STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0630Putative sel1-like repeat; harboring protein. (432 aa)    
Predicted Functional Partners:
Rmet_0627
Putative Phospholipase D family protein.
 
  
 0.948
Rmet_0629
Putative phospholipase protein.
  
  
 0.784
Rmet_0626
Rhs element Vgr protein.
  
    0.777
Rmet_0628
Putative sel1-like repeat; harboring protein.
 
   
0.776
Rmet_0603
Putative integral membrane sensor protein precursor.
  
     0.742
Rmet_2214
Conserved hypothetical protein.
  
    0.716
Rmet_1675
Putative transmembrane protein precursor.
  
    0.695
Rmet_0631
Conserved hypothetical protein with PAAR motif.
 
  
 0.656
Rmet_1902
Conserved hypothetical protein.
  
    0.611
Rmet_0192
Putative type-4 fimbrial biogenesis pilY1-related protein.
  
    0.589
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.