STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0643Flp pilus assembly protein (TadG-like). (152 aa)    
Predicted Functional Partners:
Rmet_0645
Conserved hypothetical protein.
 
    0.961
cpaE1
Flp pilus assembly ATPase.
 
  
 0.960
Rmet_0644
Flp pilus assembly protein (TadG-like).
 
     0.952
cpaB1
Flp pilus assembly CpaB precursor.
 
  
 0.938
cpaC1
Flp pilus assembly protein secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.924
tadB
Flp pilus assembly protein TadB.
 
  
 0.921
cpaA1
Flp pilus assembly leader peptidase CpaA.
 
  
 0.868
tadC
Bacterial type II secretion system protein, probably involved in Flp pilus synthesis.
 
    0.846
Rmet_0649
Predicted ATPase with chaperone activity.
 
    0.823
cpaF1
Flp pilus assembly ATPase CpaF.
 
  
 0.806
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.