STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilA-4Flp/Fap pilin component; Putative pilus subunit protein. (57 aa)    
Predicted Functional Partners:
cpaB1
Flp pilus assembly CpaB precursor.
 
  
 0.914
cpaE1
Flp pilus assembly ATPase.
 
  
 0.870
cpaA1
Flp pilus assembly leader peptidase CpaA.
 
  
 0.863
cpaC1
Flp pilus assembly protein secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.847
tadC
Bacterial type II secretion system protein, probably involved in Flp pilus synthesis.
 
  
 0.811
tadB
Flp pilus assembly protein TadB.
 
  
 0.802
Rmet_0645
Conserved hypothetical protein.
 
  
 0.781
Rmet_0644
Flp pilus assembly protein (TadG-like).
 
  
 0.737
cpaF1
Flp pilus assembly ATPase CpaF.
 
  
 0.697
Rmet_0643
Flp pilus assembly protein (TadG-like).
 
  
 0.686
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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