STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0657Conserved hypothetical protein. (408 aa)    
Predicted Functional Partners:
gtrA
Putative Bactoprenol-linked glucose translocase (Flippase) GtrA.
 
    0.654
Rmet_0953
Putative branched-chain amino acid permease protein (ABC superfamily); Belongs to the binding-protein-dependent transport system permease family.
   
    0.511
Rmet_0659
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Sigma-54 dependent DNA-binding transcriptional regulator.
  
    0.497
ompW2
Porin, OmpW-family.
  
    0.458
cpaC1
Flp pilus assembly protein secretin CpaC; Belongs to the bacterial secretin family.
  
    0.438
pilA-3
Flp/Fap pilin component; Putative pilus subunit protein.
 
    0.406
cpaB1
Flp pilus assembly CpaB precursor.
  
    0.403
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.