STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilJType IV pilus transmembrane protein PilJ. (733 aa)    
Predicted Functional Partners:
pilL2
Type IV pilus protein histidine kinase/response regulator hybrid PilL.
 
 0.999
pilI
Type IV pilus signal transduction protein PilI.
 
 0.994
pilG
Type IV pilus response regulator PilG.
 
 0.987
pilH
Type IV pilus response regulator PilH.
 
 0.986
pilN
Tfp pilus assembly protein PilN.
  
  
 0.829
pilP
Type IV pilus assembly protein PilP.
  
  
 0.827
Rmet_0591
Putative signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
 0.819
pilM
Type IV pilus assembly protein PilM.
  
  
 0.810
pilO
Type IV pilus assembly protein PilO.
  
  
 0.801
pdeA
c-di-GMP phosphodiesterase A.
 
 
 0.776
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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