Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rmet_0683 | lolA | Rmet_0683 | Rmet_0686 | Smr protein/MutS2 C-terminal. | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.636 |
| Rmet_0687 | lolA | Rmet_0687 | Rmet_0686 | Probable lipoprotein transmembrane; putative exported protein. | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.778 |
| Rmet_1794 | lolA | Rmet_1794 | Rmet_0686 | Conserved hypothetical protein. | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.736 |
| Rmet_1794 | lolD | Rmet_1794 | Rmet_1041 | Conserved hypothetical protein. | Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.843 |
| Rmet_1794 | ybbA | Rmet_1794 | Rmet_1792 | Conserved hypothetical protein. | ABC transporter related, ATP binding protein. | 0.983 |
| amiC | lolA | Rmet_0526 | Rmet_0686 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.671 |
| lolA | Rmet_0683 | Rmet_0686 | Rmet_0683 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Smr protein/MutS2 C-terminal. | 0.636 |
| lolA | Rmet_0687 | Rmet_0686 | Rmet_0687 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Probable lipoprotein transmembrane; putative exported protein. | 0.778 |
| lolA | Rmet_1794 | Rmet_0686 | Rmet_1794 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Conserved hypothetical protein. | 0.736 |
| lolA | amiC | Rmet_0686 | Rmet_0526 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | N-acetylmuramoyl-L-alanine amidase. | 0.671 |
| lolA | lolB | Rmet_0686 | Rmet_0291 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer-membrane lipoprotein lolB precursor (involved in outer membrane biogenesis); Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.680 |
| lolA | lolD | Rmet_0686 | Rmet_1041 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.897 |
| lolA | lolE-2 | Rmet_0686 | Rmet_1040 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane-specific lipoprotein transporter subunit; membrane component of ABC superfamily. | 0.868 |
| lolA | ostA | Rmet_0686 | Rmet_0436 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.679 |
| lolA | yaeT | Rmet_0686 | Rmet_1443 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor,outer membrane protein, surface antigen OMA87; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.685 |
| lolA | ybbA | Rmet_0686 | Rmet_1792 | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter related, ATP binding protein. | 0.713 |
| lolB | lolA | Rmet_0291 | Rmet_0686 | Outer-membrane lipoprotein lolB precursor (involved in outer membrane biogenesis); Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Outer membrane lipoprotein carrier protein LolA precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.680 |
| lolB | lolD | Rmet_0291 | Rmet_1041 | Outer-membrane lipoprotein lolB precursor (involved in outer membrane biogenesis); Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.791 |
| lolB | ostA | Rmet_0291 | Rmet_0436 | Outer-membrane lipoprotein lolB precursor (involved in outer membrane biogenesis); Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.458 |
| lolD | Rmet_1794 | Rmet_1041 | Rmet_1794 | Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Conserved hypothetical protein. | 0.843 |
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