STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0690Putative amino-acid-binding periplasmic abc transporter protein; Belongs to the bacterial solute-binding protein 3 family. (282 aa)    
Predicted Functional Partners:
gltJ-2
Glutamate and aspartate transporter subunit; membrane component of ABC superfamily.
 
 
 0.931
aapP
Amino-acid transporter subunit; ATP-binding component of ABC superfamily.
 
 
 0.928
aapM
ABC-type transporter, permease component: PAAT family.
 
 
 0.927
gltK
Glutamate and aspartate transporter subunit; membrane component of ABC superfamily.
 
 
 0.856
gltL
Glutamate and aspartate transporter subunit; ATP-binding component of ABC superfamily.
 
 
 0.856
gltJ
Glutamate and aspartate transporter subunit; membrane component of ABC superfamily.
 
 
 0.855
Rmet_0689
Conserved hypothetical protein.
  
    0.439
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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