STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilA-5Type IV pilus structural subunit PilA; Serine-based site-specific recombinase (fragment); Belongs to the N-Me-Phe pilin family. (154 aa)    
Predicted Functional Partners:
pilE
Fimbrial protein precursor (Pilin) (Strain P1).
  
  
  0.946
pilA
Type IV pilus structural subunit PilA; Belongs to the N-Me-Phe pilin family.
  
  
 
0.923
pilM
Type IV pilus assembly protein PilM.
 
  
 0.711
pilQ
Pili assembly protein PilQ.
 
  
 0.669
Rmet_0193
Putative Type-4 pilus assembly protein PilE (pilE1).
 
  
 0.661
pilD
Type IV pilus prepilin leader peptidase 1; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.642
pilC
Type IV pilus assembly protein PilC.
 
  
 0.629
pilO
Type IV pilus assembly protein PilO.
  
   
 0.609
pilU
PilU, Type IV pilus twitching motility protein.
  
  
 0.562
pilT
PilT, Type IV pilus twitching motility protein.
 
  
 0.562
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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