STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0794Putative uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein. (380 aa)    
Predicted Functional Partners:
Rmet_0797
Sugar ATP binding abc transporter protein; ATPase component: CUT2 family.
 
 
 0.993
Rmet_0795
ABC-type transporter, permease component; inner membrane subunit precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.989
Rmet_0796
ABC-type transporter, permease component; inner membrane subunit precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
Rmet_0793
Conserved hypothetical protein.
  
    0.496
guaA
GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP.
     
 0.438
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.