STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0799Putative ABC-type transporter, permease component: QAT family. (238 aa)    
Predicted Functional Partners:
Rmet_0800
Putative substrate-binding region of ABC-type glycine betaine transport system: QATfamily.
 
 0.999
Rmet_0802
Osmoprotectant transport system ATP-binding protein; Putative ABC-type transporter glycine betaine/L-proline transporter, ATPase subunit, ATPase component: QAT family.
 0.996
Rmet_0801
Putative glycine betaine/carnitine/choline ABC transporter, permease component: QAT family.
 
 
 
0.978
Rmet_1598
ABC-type transporter: periplasmic glycine betaine/choline-binding lipoprotein and permease components transmembrane.
 
 
0.954
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.