Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rmet_0804Putative membrane protease subunit, stomatin/prohibitin-like transmembrane protein. (251 aa)    
Predicted Functional Partners:
Rmet_0805
Putative membrane-bound serine protease (Clpp class), S49 family.
 
    0.966
ftsH
Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family.
   
 0.719
Rmet_0283
Peptidase M16-like protein (Probable peptidase signal peptide protein).
  
 0.542
Rmet_0282
Peptidase M16-like protein (Zn-dependent peptidase); Belongs to the peptidase M16 family.
  
 0.535
tnpA-29
Transposase catalytic site ISRme4.
   
    0.526
Rmet_0806
Putative MFS transporter.
   
 
 0.520
coxL
Putative carbon-monoxide dehydrogenase, large subunt.
  
    0.517
Rmet_0803
Hypothetical protein; putative membrane protein.
  
    0.486
Rmet_1454
Conserved hypothetical protein.
  
 
 0.462
ctpF
Cation-transporting ATPase F.
   
 0.437
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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