STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0813Conserved hypothetical protein. (182 aa)    
Predicted Functional Partners:
minE
Cell division topological specificity factor MinE down with RPM proteomics BL (0.5); Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.780
fbp
Peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase).
  
    0.707
phoU
Negative regulator of PhoR/PhoB two-component regulator; Plays a role in the regulation of phosphate uptake.
   
    0.576
ygjP
Putative metal dependent hydrolase.
 
    0.573
Rmet_0814
Conserved hypothetical protein.
  
    0.503
ybcJ
Putative RNA-binding protein.
 
    0.473
glnS
glutamyl-tRNA synthetase.
  
    0.458
gltB
Glutamate synthase, large subunit.
      
 0.431
lolB
Outer-membrane lipoprotein lolB precursor (involved in outer membrane biogenesis); Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
   
    0.424
lepB
Leader peptidase (signal peptidase I); Belongs to the peptidase S26 family.
   
    0.408
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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