STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldHNADP-dependent fatty aldehyde dehydrogenase. (525 aa)    
Predicted Functional Partners:
sucA
2-oxoglutarate decarboxylase, thiamin-requiring (E1 component).
   
 
 0.827
icd
Isocitrate dehydrogenase, specific for NADP+.
   
 0.819
Rmet_0158
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.710
Rmet_0833
Transcriptional regulator (GntR family).
 
    0.615
gudD
(D)-glucarate dehydratase 1.
 
  
 0.492
Rmet_0020
Fumarylacetoacetate hydrolase family protein.
 
 
 0.465
gltB
Glutamate synthase, large subunit.
  
  
 0.445
evgS
Hybrid sensory histidine kinase in two-component regulatory system.
  
 
 0.425
Oxidoreductase
Oxidoreductase; molybdopterin subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.400
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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