STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0839(S)-2-hydroxy-acid oxidase 1. (361 aa)    
Predicted Functional Partners:
piuC
PKHD-type hydroxylase (Iron-uptake factor piuC).
 
  
 0.910
lldP
Glycolate transporter; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.881
Rmet_0837
Hydroxamate-type ferrisiderophore receptor.
 
    0.832
Rmet_0367
Putative Fe-S oxidoreductase FAD/FMN-containing dehydrogenase oxidoreductase protein.
  
 0.674
abmA
2-aminobenzoyl-CoA monooxygenase/reductase.
  
  
 0.619
phnW
2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
 0.581
tonB
TonB-like protein, membrane spanning.
  
  
 0.525
guaA
GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP.
  
  
 0.479
glpD
Sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding protein.
  
  
 0.472
pheA
Prephenate dehydratase, Chorismate mutase.
  
  
 0.467
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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