STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0841Putative enoyl-CoA hydratase/isomerase. (272 aa)    
Predicted Functional Partners:
hbdA
3-hydroxybutyryl-CoA dehydrogenase.
 0.961
paaH
3-hydroxybutyryl-CoA dehydrogenase.
 0.952
Rmet_1816
acyl-CoA dehydrogenase, short-chain specific.
  
 0.945
paaF
enoyl-CoA hydratase-isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.944
ivd1
isovaleryl-CoA dehydrogenase.
  
 0.943
Rmet_0108
acyl-CoA dehydrogenase, short-chain specific.
  
 0.943
gcdH
Glutaryl-CoA dehydrogenase.
  
 0.943
Rmet_1672
MaoC-like dehydratase.
  
 0.932
paaG-2
acyl-CoA hydratase.
  
  
 
0.929
fadB
3-hydroxyacyl-CoA dehydrogenase; Fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase.
0.928
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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