STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0853Serine/threonine protein phosphatase. (304 aa)    
Predicted Functional Partners:
Rmet_0854
Serine/threonine protein kinase.
 
 
 0.961
lpdA
Dihydrolipoamide dehydrogenase.
  
 0.846
Rmet_2061
Conserved hypothetical protein.
  
    0.719
Rmet_0294
Putative GTPase.
  
    0.706
Rmet_2419
Conserved hypothetical protein; putative transmembrane protein.
  
    0.695
Rmet_2470
Type IV-pili assembly fimV-related transmembrane protein.
  
     0.684
Rmet_6429
Hypothetical protein.
       0.642
pilL2
Type IV pilus protein histidine kinase/response regulator hybrid PilL.
  
  
 0.633
gcvT-2
Aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex; The glycine cleavage system catalyzes the degradation of glycine.
   
 0.631
pilP
Type IV pilus assembly protein PilP.
  
    0.628
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.