STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0854Serine/threonine protein kinase. (353 aa)    
Predicted Functional Partners:
Rmet_0853
Serine/threonine protein phosphatase.
 
 
 0.961
Rmet_2562
Phosphoprotein phosphatase.
 
 
 0.869
Rmet_6429
Hypothetical protein.
       0.773
Rmet_0294
Putative GTPase.
  
    0.731
Rmet_2061
Conserved hypothetical protein.
  
    0.704
Rmet_2419
Conserved hypothetical protein; putative transmembrane protein.
  
   
 0.693
Rmet_2470
Type IV-pili assembly fimV-related transmembrane protein.
 
     0.653
pilF
Type IV pilus biogenesis protein PilF.
 
    0.642
pilP
Type IV pilus assembly protein PilP.
  
    0.639
pilZ
Type IV fimbrial biogenesis protein PilZ.
  
  
 0.630
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.