Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| coxB | coxC | Rmet_0261 | Rmet_0265 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase, subunit III. | 0.999 |
| coxB | ctaB | Rmet_0261 | Rmet_0270 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protoheme IX farnesyltransferase (heme O synthase); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.938 |
| coxB | cyoA | Rmet_0261 | Rmet_0948 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome o ubiquinol oxidase subunit II. | 0.438 |
| coxB | cyoB | Rmet_0261 | Rmet_0949 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.994 |
| coxB | cyoC | Rmet_0261 | Rmet_0950 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome o ubiquinol oxidase subunit III. | 0.996 |
| coxB | cyoD | Rmet_0261 | Rmet_0951 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome o ubiquinol oxidase subunit IV. | 0.945 |
| coxB | hoxF | Rmet_0261 | Rmet_1522 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | NAD-reducing hydrogenase diaphorase moiety large subunit. | 0.941 |
| coxB | nuoM | Rmet_0261 | Rmet_0939 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | NADH:ubiquinone oxidoreductase, membrane subunit M. | 0.921 |
| coxB | petA | Rmet_0261 | Rmet_3230 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Ubiquinol-cytochrome c reductase, iron-sulfur subunit (Rieske Fe-S protein); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.993 |
| coxB | petB | Rmet_0261 | Rmet_3229 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome b subunit, Ubiquinol-cytochrome-c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.998 |
| coxC | coxB | Rmet_0265 | Rmet_0261 | Cytochrome c oxidase, subunit III. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
| coxC | ctaB | Rmet_0265 | Rmet_0270 | Cytochrome c oxidase, subunit III. | Protoheme IX farnesyltransferase (heme O synthase); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.956 |
| coxC | cyoA | Rmet_0265 | Rmet_0948 | Cytochrome c oxidase, subunit III. | Cytochrome o ubiquinol oxidase subunit II. | 0.960 |
| coxC | cyoB | Rmet_0265 | Rmet_0949 | Cytochrome c oxidase, subunit III. | Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.970 |
| coxC | cyoD | Rmet_0265 | Rmet_0951 | Cytochrome c oxidase, subunit III. | Cytochrome o ubiquinol oxidase subunit IV. | 0.948 |
| coxC | hoxF | Rmet_0265 | Rmet_1522 | Cytochrome c oxidase, subunit III. | NAD-reducing hydrogenase diaphorase moiety large subunit. | 0.932 |
| coxC | nuoM | Rmet_0265 | Rmet_0939 | Cytochrome c oxidase, subunit III. | NADH:ubiquinone oxidoreductase, membrane subunit M. | 0.933 |
| coxC | petA | Rmet_0265 | Rmet_3230 | Cytochrome c oxidase, subunit III. | Ubiquinol-cytochrome c reductase, iron-sulfur subunit (Rieske Fe-S protein); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.976 |
| coxC | petB | Rmet_0265 | Rmet_3229 | Cytochrome c oxidase, subunit III. | Cytochrome b subunit, Ubiquinol-cytochrome-c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.985 |
| ctaB | coxB | Rmet_0270 | Rmet_0261 | Protoheme IX farnesyltransferase (heme O synthase); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.938 |
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