STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_0954Putative branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (400 aa)    
Predicted Functional Partners:
Rmet_0953
Putative branched-chain amino acid permease protein (ABC superfamily); Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
livF9
ABC transporter, ATP-binding subunit.
 
 0.996
livG9
ABC-type transporter, ATP-binding protein (livG-like).
 
 0.995
Rmet_0952
Urea transport system substrate-binding protein; ABC-type transporter with twin-arginine translocation pathway signal, periplasmic component: HAAT family.
 
 
 0.993
ureD
Urea amidohydrolase (urease) accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
  
 0.789
Rmet_1227
Branched-chain amino acid ABC-type transport system; Belongs to the binding-protein-dependent transport system permease family.
  
 0.759
ureE
Urea amidohydrolase (urease) accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.710
Rmet_1861
ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 0.652
ureF
Urea amidohydrolase (urease) accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.633
ureA
Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.
 
    0.605
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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