STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxB1Thioredoxin reductase. (353 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase, peroxiredoxin (Thioredoxin-dependent peroxide reductase).
  
 
 0.761
trxA
Thioredoxin 1; Belongs to the thioredoxin family.
  
 
 0.711
Rmet_2654
Antioxidant protein LsfA.
  
 
 0.593
Rmet_1064
Putative metal-dependent phosphoesterase (PHP family).
       0.579
Rmet_2636
Thioredoxin domain-containing protein.
  
 
 0.530
Rmet_1065
Putative translation factor (SUA5); Belongs to the SUA5 family.
     
 0.528
Rmet_2517
Putative chromate transport protein (COOH-part).
     
 0.480
Rmet_2518
Putative chromate transport protein.
     
 0.480
hoxO
HoxO Hydrogenase expression/formation protein hoxO (belongs to CMGI-2); Belongs to the HupG/HyaE family.
  
 
 0.474
Rmet_1067
Conserved hypothetical protein.
 
    0.462
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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