STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1136Major facilitator superfamily (MFS_1) transporter and phospholipid/glycerol acyltransferase. (634 aa)    
Predicted Functional Partners:
Rmet_0610
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.910
fadD-2
acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase).
 
 
 0.863
matB
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.817
Rmet_1137
Glutathione S-transferase-like protein.
  
    0.782
Rmet_2525
AMP-dependent synthetase and ligase.
  
 
 0.762
fadD
Long-chain-fatty-acid-CoA ligase (Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II).
  
 
 0.707
Rmet_1863
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 
 0.631
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
    0.623
plsY
Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.593
cdsA
CDP-diglyceride synthase; Belongs to the CDS family.
  
 
 0.566
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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