STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1252Conserved hypothetical protein. (290 aa)    
Predicted Functional Partners:
Rmet_1253
Putative dna binding protein.
 
     0.897
parG
Regulator of plasmid copy number.
 
     0.845
Rmet_1257
Conserved hypothetical protein.
 
    0.836
traF
Plasmid conjugal transfer transmembrane protein.
 
    0.829
virD2
Relaxase type IV secretory pathway VirD2(protein belongs to CMGI-2).
 
    0.800
parG-2
Regulator of plasmid copy number (ribbon-helix-helix).
 
    0.780
Rmet_1250
Putative lipoprotein.
 
    0.778
parG-3
Regulator of plasmid copy number (ribbon-helix-helix).
 
     0.778
Rmet_1482
Lipoprotein.
 
    0.775
Rmet_3027
Lipoprotein.
 
     0.773
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.