STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parB-2ParB nuclease. (680 aa)    
Predicted Functional Partners:
yupB-2
F plasmid protein 32-like protein (protein belongs to CMGI-3).
 
    0.878
parG
Regulator of plasmid copy number.
  
   
 0.749
parG-3
Regulator of plasmid copy number (ribbon-helix-helix).
  
   
 0.749
Rmet_1257
Conserved hypothetical protein.
  
    0.748
Rmet_1487
Conserved hypothetical protein.
  
    0.744
traF
Plasmid conjugal transfer transmembrane protein.
 
  
 0.742
Rmet_3021
Conserved hypothetical protein.
  
    0.733
traF-3
Plasmid conjugal transfer transmembrane protein.
 
  
 0.728
parG-2
Regulator of plasmid copy number (ribbon-helix-helix).
  
  
 0.727
traF-2
Plasmid conjugal transfer transmembrane protein.
 
  
 0.726
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.