STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1597Conserved hypothetical protein. (115 aa)    
Predicted Functional Partners:
ftsK-2
DNA translocase ftsK, DNA segregation ATPase; Belongs to the FtsK/SpoIIIE/SftA family.
       0.761
Rmet_1598
ABC-type transporter: periplasmic glycine betaine/choline-binding lipoprotein and permease components transmembrane.
  
    0.554
Rmet_1641
Conserved hypothetical protein.
  
    0.533
kynB
Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
  
    0.533
Rmet_1600
Conserved hypothetical protein.
  
    0.520
Rmet_1599
Cytochrome c, class I precursor.
  
    0.517
Rmet_1594
Uncharacterized protein; Transcriptional regulator, LysR-family (fragment).
       0.499
Rmet_1595
Conserved hypothetical protein.
       0.460
Rmet_1731
Conserved hypothetical protein.
  
    0.423
Rmet_0345
Conserved hypothetical protein.
  
    0.422
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.