STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1617Putative peptide transport fused subunits of ABC superfamily: ATP-binding components; Belongs to the ABC transporter superfamily. (547 aa)    
Predicted Functional Partners:
dppC
Dipeptide transporter; membrane component of ABC superfamily.
   
 0.986
dppB
Dipeptide transporter membrane component of ABC superfamily; Putative solute-binding transport protein (Periplasmic) (fragment).
  
 0.936
dppC-3
Dipeptide transporter; membrane component of ABC superfamily.
  
 0.894
yliD
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
   
 0.893
dppC-2
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
  
 0.868
dppB-3
Dipeptide transporter; membrane component of ABC superfamily.
  
 0.717
dppB1
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
  
 0.715
yejE
Permease component of ABC superfamily transporter.
    0.709
yejB
ABC superfamily transporter subunit (permease component).
    0.684
dppB-2
ABC-type transporter, permease component: PepT family.
  
 0.680
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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