STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1627DNA-binding response regulator in two-component regulatory system. (230 aa)    
Predicted Functional Partners:
Rmet_1626
Signal transduction histidine kinase.
 
 0.996
Rmet_3584
Signal transduction histidine kinase.
 
 0.983
Rmet_0464
Putative sensory histidine kinase in two-component regulatory system with Rmet_0465.
 
 0.981
Rmet_3585
Putative two-component response regulator.
  
 
 
0.905
evgS
Hybrid sensory histidine kinase in two-component regulatory system.
 
0.893
agrS
Signal transduction histidine kinase, heavy metal sensor; Member of a two-component regulatory system.
 
 0.838
envZ-2
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.836
hmzS
Putative Signal transduction histidine kinase.
 
 
 0.834
mmfS
Periplasmic sensor signal transduction histidine kinase (Tn6048).
 
 
 0.829
phhS
Sensor histidine kinase.
 
 
 0.813
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.