STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1641Conserved hypothetical protein. (352 aa)    
Predicted Functional Partners:
kynU
Kynureninase, L-Kynurenine hydrolase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
  
 0.816
Rmet_1640
ABC-type transporter, periplasmic component; possible urea/short-chain amide ABC transporter precursor up with Au.
  
    0.567
tdo
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
  
 0.542
Rmet_1597
Conserved hypothetical protein.
  
    0.533
Rmet_2641
Putative major facilitator superfamily (MFS_1) transporter.
  
    0.533
Rmet_1731
Conserved hypothetical protein.
 
    0.440
Rmet_2890
Putative glyoxalase (bleomycin resistance protein), dioxygenase superfamily.
 
     0.433
Rmet_1642
Hypothetical protein.
       0.430
Rmet_1912
Oxidoreductase (protocatechuate 3,4-dioxygenase beta subunit / hydroxyquinol 1,2-dioxygenase).
  
     0.413
hutG4
N-formylglutamate amidohydrolase.
  
    0.402
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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