STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaC2Poly(3-hydroxybutyrate) polymerase. (572 aa)    
Predicted Functional Partners:
phaB
Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.986
Rmet_1672
MaoC-like dehydratase.
 
 
 0.986
phaZ2
Intracellular poly(3-hydroxybutyrate) depolymerase.
 
 
 0.967
phaZ1
Intracellular poly(3-hydroxybutyrate) depolymerase.
 
 
 0.960
phaB2
Conserved hypothetical protein (partial)(gene belongs to CMGI-2).
 
 
 0.956
phaR
Transcriptional regulator of Polyhydroxyalkanoate synthesis (repressor).
 
   
 0.923
phaC1
Poly(3-hydroxybutyrate) polymerase.
  
  
 
0.905
ptb
Phosphate acetyltransferase (Phosphotransacetylase).
  
 0.715
ackA2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 0.573
Rmet_1157
Hydrolase, alpha/beta fold family.
 
   
 0.561
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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