STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fnrDNA-binding transcriptional dual regulator, global regulator of anaerobic growth. (244 aa)    
Predicted Functional Partners:
Rmet_6469
Hypothetical protein.
       0.773
hemN-2
Coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.548
evgS
Hybrid sensory histidine kinase in two-component regulatory system.
  
 
 0.513
Rmet_1693
Chemotaxis sensory transducer.
  
  
 0.491
rpoB
RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.453
Rmet_0591
Putative signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 
 0.443
rpoC
RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.442
bcsB
Cellulose synthase, cyclic di-GMP binding subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
 0.432
Rmet_2017
Hypothetical protein.
  
 0.425
Rmet_3487
Conserved hypothetical protein.
   
 0.423
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.