STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1730Uncharacterized protein; Major facilitator superfamily (MFS) metabolite/H+ symporter (fragment). (66 aa)    
Predicted Functional Partners:
Rmet_1731
Conserved hypothetical protein.
  
    0.778
Rmet_3594
Conserved hypothetical protein.
  
    0.581
Rmet_3475
Putative ABC-type branched-chain amino acid transport system, periplasmic component.
  
    0.557
Rmet_1732
Transcriptional regulator, AraC family.
  
    0.542
Rmet_2498
Conserved hypothetical protein.
  
    0.540
Rmet_2275
Putative AAA ATPase protein.
  
    0.515
gspL
General secretion pathway protein L.
  
     0.511
gspM
General secretion pathway protein M.
  
     0.495
Rmet_2242
Conserved hypothetical protein (secreted).
  
    0.430
Rmet_3399
Putative Permease of the major facilitator superfamily MFS_1.
  
     0.420
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.