STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agrCRND efflux system, outer membrane lipoprotein, NodT. (488 aa)    
Predicted Functional Partners:
agrB
RND efflux pump, membrane fusion protein, CzcB subfamily; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.883
agrA
Cation/multidrug efflux pump, RND family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.854
mdtA
Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.784
acrA
Cation/multidrug efflux system, mebrane-fusion component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.775
mdtA-2
Multidrug resistance protein mdtA precursor (Multidrug transporter mdtA); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.770
acrA-2
Multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.754
acrF
Multidrug efflux system protein.
 
 0.702
acrB
Multidrug efflux system protein.
 
 0.667
emrA
Multidrug efflux system (MFS family).
 
 
 0.654
Rmet_3581
Putative multidrug RND transporter, membrane fusion protein (AcrA-MtdA-HylD family); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.639
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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