STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1850Conserved hypothetical protein. (154 aa)    
Predicted Functional Partners:
Rmet_1849
Putative oxidoreductase/alcolhol dehydrogenase.
  
    0.656
Rmet_1851
Short-chain dehydrogenase/reductase SDR.
  
  
 0.614
Rmet_2491
Conserved hypothetical protein.
  
    0.500
Rmet_1847
Glutathione S-transferase.
   
   0.499
Rmet_1848
Ribulose-5-phosphate 4-epimerase or aldolase.
  
  
 0.493
Rmet_2985
Putative barstar (Ribonuclease inhibitor).
  
     0.458
Rmet_1852
Acyl-CoA dehydrogenase.
  
  
 0.449
fadB
3-hydroxyacyl-CoA dehydrogenase; Fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.423
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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