STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_1905Transcriptional regulator, LacI-family. (355 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit.
    
 
 0.922
ptsH
Phosphocarrier protein (HPr).
 
 
 
 0.911
talB
Transaldolase B; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
   
 
 0.751
mosC
Permease Membrane protein mosC Major facilitator superfamily MFS_1.
  
  
 0.739
mmsA
Methylmalonate-semialdehyde dehydrogenase.
    
 
 0.723
Rmet_1799
Transcriptional regulator, ArsR family.
   
 
 0.719
Rmet_1908
Conserved hypothetical protein.
 
  
 0.616
bug-21
Extra-cytoplasmic Solute Receptor.
  
    0.605
Rmet_1922
Thioredoxin reductase.
   
 
 0.576
Rmet_2591
Transcriptional regulator, DeoR family.
  
  
 0.552
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.