node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
infB | nusA | Rmet_2031 | Rmet_2032 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 0.984 |
infB | nusG | Rmet_2031 | Rmet_3339 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription termination factor; Participates in transcription elongation, termination and antitermination. | 0.502 |
infB | rbfA | Rmet_2031 | Rmet_2030 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 30s ribosome binding factor; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.978 |
infB | rimM | Rmet_2031 | Rmet_0749 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.518 |
infB | rimP | Rmet_2031 | Rmet_2033 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.932 |
infB | rplM | Rmet_2031 | Rmet_0410 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.964 |
infB | rpsB | Rmet_2031 | Rmet_1435 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 30S ribosomal subunit protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.987 |
infB | rpsJ | Rmet_2031 | Rmet_3323 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 30S ribosomal subunit protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.956 |
infB | rpsL | Rmet_2031 | Rmet_3327 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 30S ribosomal subunit protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.950 |
infB | truB | Rmet_2031 | Rmet_2029 | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.979 |
nusA | infB | Rmet_2032 | Rmet_2031 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | Translation initiation factor 2 (IF-2, GTPase); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.984 |
nusA | nusG | Rmet_2032 | Rmet_3339 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | Transcription termination factor; Participates in transcription elongation, termination and antitermination. | 0.975 |
nusA | rbfA | Rmet_2032 | Rmet_2030 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 30s ribosome binding factor; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.679 |
nusA | rimM | Rmet_2032 | Rmet_0749 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.890 |
nusA | rimP | Rmet_2032 | Rmet_2033 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.987 |
nusA | rplM | Rmet_2032 | Rmet_0410 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.879 |
nusA | rpsB | Rmet_2032 | Rmet_1435 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 30S ribosomal subunit protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.973 |
nusA | rpsJ | Rmet_2032 | Rmet_3323 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 30S ribosomal subunit protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.966 |
nusA | rpsL | Rmet_2032 | Rmet_3327 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | 30S ribosomal subunit protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.960 |
nusA | truB | Rmet_2032 | Rmet_2029 | Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination. | tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.892 |