STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2038Conserved hypothetical protein. (81 aa)    
Predicted Functional Partners:
rdxB
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
  
 0.911
Rmet_2039
Conserved hypothetical protein.
  
  
 0.890
ccoP
Cbb3-type cytochrome oxidase, diheme subunit IV; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
    0.840
ccoQ
Cbb3-type cytochrome oxidase, subunit III.
  
    0.722
Rmet_0826
Putative transmembrane protein; putative transporter, APC superfamily.
  
     0.719
Rmet_0079
Conserved hypothetical protein.
  
    0.615
ccoO
Cbb3-type cytochrome oxidase, monoheme subunit II.
       0.612
ccoN
Cbb3-type cytochrome oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.594
rdxS
Cbb3-type cytochrome oxidase, maturation protein.
 
    0.593
Rmet_2275
Putative AAA ATPase protein.
  
    0.579
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.