STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2121ABC-type transporter, ATPase component: NitT family. (270 aa)    
Predicted Functional Partners:
Rmet_2120
ABC-type transporter, permease component: TauT family.
 
  
 0.950
Rmet_2122
ABC-type transporter, periplasmic component.
 
  
 0.916
tauC
Taurine ABC-type transporter, permease component: TauT family.
 
  
 0.801
Rmet_0394
ABC-type transporter, permease component: TauT family.
  
 0.770
nasE
ABC-type transporter, permease component: NitT family.
  
 0.762
Rmet_2220
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
  
 0.741
ssuC
Alkanesulfonate transporter subunit; membrane component of ABC superfamily.
  
 0.694
nasF
ABC-type transporter, periplasmic component: NitT family.
  
 0.659
tauA
Taurine ABC-type transporter, periplasmic component.
 
  
 0.621
Rmet_2219
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component.
 
  
 0.505
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.