STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yejEPermease component of ABC superfamily transporter. (376 aa)    
Predicted Functional Partners:
yejB
ABC superfamily transporter subunit (permease component).
  
 0.975
yejF
Transporter subunits of ABC superfamily: ATP-binding component; Belongs to the ABC transporter superfamily.
  
 0.962
yejA
ABC superfamily transporter subunit (periplasmic-binding component).
 
  
 0.955
dppB
Dipeptide transporter membrane component of ABC superfamily; Putative solute-binding transport protein (Periplasmic) (fragment).
  
 0.738
Rmet_1617
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components; Belongs to the ABC transporter superfamily.
    0.709
dppB-3
Dipeptide transporter; membrane component of ABC superfamily.
  
 0.705
dppD1
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components; Belongs to the ABC transporter superfamily.
    0.699
dppB1
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
  
 0.677
dppD
Dipeptide transporter; ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
  
 0.659
ddpD
D-ala-D-ala transporter subunit; ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
  
 0.619
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.