STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yejAABC superfamily transporter subunit (periplasmic-binding component). (661 aa)    
Predicted Functional Partners:
yejB
ABC superfamily transporter subunit (permease component).
 
  
 0.959
yejE
Permease component of ABC superfamily transporter.
 
  
 0.955
yejF
Transporter subunits of ABC superfamily: ATP-binding component; Belongs to the ABC transporter superfamily.
 
  
 0.931
dppD1
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components; Belongs to the ABC transporter superfamily.
 
  
 0.616
fabI-2
Enoyl-(acyl-carrier-protein) reductase, NADH-dependent.
  
    0.568
Rmet_2496
Putative extracellular solute-binding, family 5 ABC-type transporter protein.
 
 
0.486
dppB
Dipeptide transporter membrane component of ABC superfamily; Putative solute-binding transport protein (Periplasmic) (fragment).
 
  
 0.474
dppB-3
Dipeptide transporter; membrane component of ABC superfamily.
 
  
 0.466
dppC-3
Dipeptide transporter; membrane component of ABC superfamily.
 
  
 0.465
dppA1b
Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily.
  
 
 0.458
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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