STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evgSHybrid sensory histidine kinase in two-component regulatory system. (815 aa)    
Predicted Functional Partners:
Rmet_6548
Putative sensory box protein/GGDEF family protein.
 
 0.996
Rmet_0591
Putative signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 0.992
Rmet_6547
Putative sensory box protein/GGDEF family protein.
 
 0.992
pilL2
Type IV pilus protein histidine kinase/response regulator hybrid PilL.
  
 
0.986
Rmet_2153
Two component transcriptional regulator, LuxR family.
 
 
 0.984
Rmet_2259
Conserved hypothetical protein.
 
  
 0.978
vsrB
Response regulator receiver :ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.
 
 
0.972
Rmet_3356
ATP-binding region, ATPase-like protein.
  
  
 0.969
Rmet_1195
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.968
pilH
Type IV pilus response regulator PilH.
 
 0.957
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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