STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2166Conserved hypothetical protein. (419 aa)    
Predicted Functional Partners:
Rmet_2164
KAP P-loop containing nucleoside triphosphate hydrolase.
 
    0.949
Rmet_2165
Conserved hypothetical protein.
 
    0.949
Rmet_2167
TatD Mg-dependent-related deoxyribonuclease.
 
    0.931
Rmet_1472
KAP P-loop.
 
     0.772
Rmet_1471
Conserved hypothetical protein.
 
     0.761
Rmet_1469
TatD-related deoxyribonuclease.
 
    0.757
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase (NADPH- dependent nitrile oxidoreductase); Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
  
  
 0.634
Rmet_1101
Putative 6-pyruvoyl-tetrahydropterin (PTP)synthase.
  
  
 0.586
ptpS
6-Pyruvoyl tetrahydrobiopterin synthase protein.
  
  
 0.586
Rmet_1475
Lipoprotein.
  
    0.556
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.