STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2201beta-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa)    
Predicted Functional Partners:
abmA
2-aminobenzoyl-CoA monooxygenase/reductase.
 
  
 0.933
Rmet_2200
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.886
Rmet_2199
acyl-CoA dehydrogenase-like protein.
 
  0.867
Rmet_2197
4-hydroxybenzoyl CoA thioesterase.
 
 
 0.865
abmE
Putative translation initiation inhibitor, yjgH family.
 
    0.847
Rmet_2198
acid-CoA ligase.
 
  
 0.821
Rmet_3146
Transcriptional regulator, MarR-family.
 
   
 0.598
Rmet_0182
Putative short chain dehydrogenase/reductase SDR, oxidoreductase protein.
  
     0.542
prpE
propionyl-CoA synthetase.
     
 0.489
fabD
malonyl-CoA-(acyl-carrier-protein) transacylase.
 
 
 0.432
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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