STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2215Rhodanese-related sulfurtransferase. (532 aa)    
Predicted Functional Partners:
Rmet_2216
Cysteine dioxygenase type I.
 
  
 0.965
Rmet_0396
Putative cysteine dioxygenase type I.
 
  
 0.775
Rmet_2217
Acyl-CoA dehydrogenase.
 
  
 0.748
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.702
ssuD1
Alkanesulfonate monooxygenase, FMNH(2)-dependent.
 
  
 0.689
Rmet_2219
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component.
 
  
 0.651
Rmet_2222
Conserved hypothetical protein.
 
  
 0.618
Rmet_2373
Conserved hypothetical protein.
  
 0.582
Rmet_1170
Cytochrome c biogenesis protein, transmembrane region.
  
 
 0.581
Rmet_2155
Cytochrome c family protein.
 
  
 0.544
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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